Autoencoder in R












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I am new in neural network and trying to replicate autoencoder in R from https://statslab.eighty20.co.za/posts/autoencoders_keras_r/



I received an error when executing this line:



autoencoder_model <- keras_model(inputs = input_layer, outputs = decoder)



The error is :



Error in py_call_impl(callable, dots$args, dots$keywords) : 
ValueError: Graph disconnected: cannot obtain value for tensor
Tensor("input_8:0", shape=(?, 4), dtype=float32) at layer "input_8".
The following previous layers were accessed without issue:


Please let me know how can I solve this problem.



Also, I will appreciate if let me know an interpretable function in R for dimension reduction through Autoencoder.
I already found this example but I can't understand how we define the number of dimensions to be reduced, could you please explain it?



`aeNN <- autoencoder(faithful, hiddenLayers = c(4,1,4), batchSize = 5,learnRate = 1e-5, momentum = 0.5, L1 = 1e-3, L2 = 1e-3,robErrorCov = TRUE)
rX <- reconstruct(aeNN, faithful)`









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    $begingroup$


    I am new in neural network and trying to replicate autoencoder in R from https://statslab.eighty20.co.za/posts/autoencoders_keras_r/



    I received an error when executing this line:



    autoencoder_model <- keras_model(inputs = input_layer, outputs = decoder)



    The error is :



    Error in py_call_impl(callable, dots$args, dots$keywords) : 
    ValueError: Graph disconnected: cannot obtain value for tensor
    Tensor("input_8:0", shape=(?, 4), dtype=float32) at layer "input_8".
    The following previous layers were accessed without issue:


    Please let me know how can I solve this problem.



    Also, I will appreciate if let me know an interpretable function in R for dimension reduction through Autoencoder.
    I already found this example but I can't understand how we define the number of dimensions to be reduced, could you please explain it?



    `aeNN <- autoencoder(faithful, hiddenLayers = c(4,1,4), batchSize = 5,learnRate = 1e-5, momentum = 0.5, L1 = 1e-3, L2 = 1e-3,robErrorCov = TRUE)
    rX <- reconstruct(aeNN, faithful)`









    share|improve this question









    New contributor




    user9440152 is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
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      0












      0








      0





      $begingroup$


      I am new in neural network and trying to replicate autoencoder in R from https://statslab.eighty20.co.za/posts/autoencoders_keras_r/



      I received an error when executing this line:



      autoencoder_model <- keras_model(inputs = input_layer, outputs = decoder)



      The error is :



      Error in py_call_impl(callable, dots$args, dots$keywords) : 
      ValueError: Graph disconnected: cannot obtain value for tensor
      Tensor("input_8:0", shape=(?, 4), dtype=float32) at layer "input_8".
      The following previous layers were accessed without issue:


      Please let me know how can I solve this problem.



      Also, I will appreciate if let me know an interpretable function in R for dimension reduction through Autoencoder.
      I already found this example but I can't understand how we define the number of dimensions to be reduced, could you please explain it?



      `aeNN <- autoencoder(faithful, hiddenLayers = c(4,1,4), batchSize = 5,learnRate = 1e-5, momentum = 0.5, L1 = 1e-3, L2 = 1e-3,robErrorCov = TRUE)
      rX <- reconstruct(aeNN, faithful)`









      share|improve this question









      New contributor




      user9440152 is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.







      $endgroup$




      I am new in neural network and trying to replicate autoencoder in R from https://statslab.eighty20.co.za/posts/autoencoders_keras_r/



      I received an error when executing this line:



      autoencoder_model <- keras_model(inputs = input_layer, outputs = decoder)



      The error is :



      Error in py_call_impl(callable, dots$args, dots$keywords) : 
      ValueError: Graph disconnected: cannot obtain value for tensor
      Tensor("input_8:0", shape=(?, 4), dtype=float32) at layer "input_8".
      The following previous layers were accessed without issue:


      Please let me know how can I solve this problem.



      Also, I will appreciate if let me know an interpretable function in R for dimension reduction through Autoencoder.
      I already found this example but I can't understand how we define the number of dimensions to be reduced, could you please explain it?



      `aeNN <- autoencoder(faithful, hiddenLayers = c(4,1,4), batchSize = 5,learnRate = 1e-5, momentum = 0.5, L1 = 1e-3, L2 = 1e-3,robErrorCov = TRUE)
      rX <- reconstruct(aeNN, faithful)`






      neural-network keras r dimensionality-reduction autoencoder






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