How to train non image data in batches from disk?












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I am working on a project where I have 50 .npy files with each of shape (77156, 30, 50, 1) representing 77156 IDs and 1 label file of shape (77156,2) (one column for ID, one for label). The data is such that the first row of all files (label and 50 data files) represent one ID, the second row represents another ID and so on. The model takes all 50 matrices of each ID at once along with the label to train.



Being said that, I am facing the common problem of training on multiple large files in Keras which are combinely too large to fit on GPU memory.
I have tried many examples and come to the conclusion of making a generator for fit_generator which would pick the data in batches and feed it to fit_generator. This is the function I need to design myself.



And I have no idea how to implement it. Any suggestions?









share









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    $begingroup$


    I am working on a project where I have 50 .npy files with each of shape (77156, 30, 50, 1) representing 77156 IDs and 1 label file of shape (77156,2) (one column for ID, one for label). The data is such that the first row of all files (label and 50 data files) represent one ID, the second row represents another ID and so on. The model takes all 50 matrices of each ID at once along with the label to train.



    Being said that, I am facing the common problem of training on multiple large files in Keras which are combinely too large to fit on GPU memory.
    I have tried many examples and come to the conclusion of making a generator for fit_generator which would pick the data in batches and feed it to fit_generator. This is the function I need to design myself.



    And I have no idea how to implement it. Any suggestions?









    share









    $endgroup$















      0












      0








      0





      $begingroup$


      I am working on a project where I have 50 .npy files with each of shape (77156, 30, 50, 1) representing 77156 IDs and 1 label file of shape (77156,2) (one column for ID, one for label). The data is such that the first row of all files (label and 50 data files) represent one ID, the second row represents another ID and so on. The model takes all 50 matrices of each ID at once along with the label to train.



      Being said that, I am facing the common problem of training on multiple large files in Keras which are combinely too large to fit on GPU memory.
      I have tried many examples and come to the conclusion of making a generator for fit_generator which would pick the data in batches and feed it to fit_generator. This is the function I need to design myself.



      And I have no idea how to implement it. Any suggestions?









      share









      $endgroup$




      I am working on a project where I have 50 .npy files with each of shape (77156, 30, 50, 1) representing 77156 IDs and 1 label file of shape (77156,2) (one column for ID, one for label). The data is such that the first row of all files (label and 50 data files) represent one ID, the second row represents another ID and so on. The model takes all 50 matrices of each ID at once along with the label to train.



      Being said that, I am facing the common problem of training on multiple large files in Keras which are combinely too large to fit on GPU memory.
      I have tried many examples and come to the conclusion of making a generator for fit_generator which would pick the data in batches and feed it to fit_generator. This is the function I need to design myself.



      And I have no idea how to implement it. Any suggestions?







      neural-network keras training





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      asked 6 mins ago









      yamini goelyamini goel

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